Tıp Fakültesi / Faculty of Medicine

Permanent URI for this collectionhttps://hdl.handle.net/11727/1403

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Author: search.filters.author.Gocmen, Julide Sedefsearch.filters.applied.f.rights: search.filters.rights.info:eu-repo/semantics/closedAccess

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    Diverse efficacy of CarbaNP test among OXA-48 carbapenemase producing Enterobacterales in an endemic region
    (2021) Istar, Elvan Hortac; Aliskan, Hikmet Eda; Gocmen, Julide Sedef; 0000-0001-9060-3195; 33661134; AAE-2282-2021
    After the first description of OXA-48 type carbapenemase, it has become endemic in Europe, Mediterranean and North African countries in a short time. OXA-48 carbapenemase is the most difficult type to determine and accurate diagnosis is crucial especially in endemic areas. The CarbaNP test was described as a rapid phenotypic evaluation method of carbapenemases activity. Sensitivity and specifity of this test were high within all carbapenemases genes. In our study, we evaluated the efficacy of CarbaNP test in routine laboratories located in an endemic area of OXA-48 producing Enterobacterales. A total of 53 Enterobacterales isolates were included in this study. Antimicrobial susceptibility of the isolates to imipenem, meropenem and ertapenem was determined. Polymerase Chain Reaction (PCR) was carried out for the detection of carbapenemases genes (bla(KPC), bla(NDM), bla(BIC), bla(IMP), bla(VIM), bla(SPM), bla(AIM), bla(DIM), bla(GIM), bla(SIM), and bla(OXA-48)). The Carba NP test was performed as in the protocol described previously. Altogether 31 isolates (58.4%) were bla(OXA-48) positive (18 Klebsiella pneumoniae, 8 Escherichia coli, 2 Serratia marcescens, 1 Enterobacter aerogenes, 1 Pantoea agglomerans and 1 Morganella morganii). Among these isolates 3 (5.6%) and 2 (3.7%) isolates were also positive for bla(VIM) and bla(SPM), respectively. The sensitivity and specifity of CarbaNP test were found 64.5, and 68.2% respectively. It was observed that determination of positive isolates is hard to distinguish and subjective. The CarbaNP test has suboptimal results and low of sensitivity and specifity for detection of OXA-48 producing Enterobacterales, and not suitable for detection of bla(OXA-48) positive isolates in routine laboratories in endemic areas.
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    Prevention of Candida biofilm formation over polystyrene by plasma polymerization technique
    (2020) Kaleli-Can, Gizem; Hortac-Istar, Elvan; Ozguzar, Hatice Ferda; Mutlu, Mehmet; Mirza, Hasan Cenk; Basustaoglu, Ahmet; Gocmen, Julide Sedef; 0000-0002-8853-3893; 0000-0002-2571-0637; F-1232-2015; AAI-8926-2021
    This work investigates the antifungal effect of plasma polymer films produced by low-pressure RF-generated plasma system using acrylic acid, 2-hydroxyethyl methacrylate, and diethyl phosphite (DEP). Unmodified and plasma-modified polystyrene (PS) microplate wells were tested by 30 biofilm-positive Candida spp. isolated from blood samples and two control strains using a quantitative plaque assay method. Regardless of the precursors and plasma parameters, biofilm formation was inhibited for all plasma-modified microplate wells. The most significant anti-biofilm effect was observed on PS modified by DEP at 90 W plasma power with the inhibition of all Candida species' biofilm formation.
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    Improvement in antimicrobial properties of titanium by diethyl phosphite plasma-based surface modification
    (2020) Kaleli-Can, Gizem; Ozguzar, Hatice Ferda; Kahriman, Selahattin; Turkal, Miranda; Gocmen, Julide Sedef; Yurtcu, Erkan; Mutlu, Mehmet
    Titanium (Ti) has been commonly used as a biomaterial for dental applications. However, they have struggled with the formation of polymicrobial infections leading to peri-implantitis. In this research, antimicrobial activity of titanium modified via diethyl phosphite (DEP) plasma onto Staphylococcus aureus (S. aureus) and Candida albicans (C. albicans), the two most frequently encountered pathogens in peri-implantitis, were investigated. Surface modification with DEP was achieved with plasma polymerization technique in a low-pressure/radio-frequency plasma using 75 W of plasma power and 10 min of exposure time under 0.15 mbar. Hydrophilicity, surface energy and roughness of Ti surface was increased and anionic Ti surface became amphoteric after surface modification according to physical and chemical examinations. This process significantly enhanced the anti-microbial efficiency of Ti towards S. aureus and C. albicans cells compared to control groups via contact killing. Moreover, DEP coating shown excellent compatibility with 93 % of L929 fibroblast cell viability. These findings revealed that amphoteric plasma polymer prepared from DEP offers promising solution for preventing biofilm formation on Ti.