Mühendislik Fakültesi / Faculty of Engineering
Permanent URI for this collectionhttps://hdl.handle.net/11727/1401
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Item A Systematic Review of Transfer Learning-Based Approaches for Diabetic Retinopathy Detection(2023) Oltu, Burcu; Karaca, Busra Kubra; Erdem, Hamit; Ozgur, Atilla; 0000-0002-9237-8347; 0000-0003-1704-1581; AAD-6546-2019Diabetic retinopathy, which is extreme visual blindness due to diabetes, has become an alarming issue worldwide. Early and accurate detection of DR is necessary to prevent the progression and reduce the risk of blindness. Recently, many approaches for DR detection have been proposed in the literature. Among them, deep neural networks (DNNs), especially Convolutional Neural Network (CNN) models, have become the most offered approach. However, designing and training new CNN architectures from scratch is a troublesome and labor-intensive task, particularly for medical images. Moreover, it requires training tremendous amounts of parameters. Therefore, transfer learning approaches as pre-trained models have become more prevalent in the last few years. Accordingly, in this study, 43 publications based on DNN and Transfer Learning approaches for DR detection between 2016 and 2021 are reviewed. The reviewed papers are summarized in 4 figures and 10 tables that present detailed information about 29 pre-trained CNN models, 13 DR data sets, and standard performance metrics.Item A novel electroencephalography based approach for Alzheimer's disease and mild cognitive impairment detection(2021) Oltu, Burcu; Aksahin, Mehmet Feyzi; Kibaroglu, Seda; 0000-0002-3964-268X; AAJ-2956-2021Background and objective: Alzheimer's disease (AD) is characterized by cognitive, behavioral and intellectual deficits. The term mild cognitive impairment (MCI) is used to describe individuals whose cognitive impairment departing from their expectations for the age that does not interfere with daily activities. To diagnose these disorders, a combination of time-consuming, expensive tests that has difficulties for the target population are evaluated, moreover, the evaluation may yield subjective results. In the presented study, a novel methodology is developed for the automatic detection of AD and MCI using EEG signals. Methods: This study analyzed the EEGs of 35 subjects (16 MCI, 8 AD, 11 healthy control) with the developed algorithm. The algorithm consists of 3 methods for analysis, discrete wavelet transform(DWT), power spectral density (PSD) and coherence. In the first approach, DWT is applied to the signals to obtain major EEG sub-bands, afterward, PSD of each sub-band is calculated using Burg's method. In the second approach, interhemispheric coherence values are calculated. The variance and amplitude summation of each sub-bands' PSD and the amplitude summation of the coherence values corresponding to the major sub-bands are determined as features. Bagged Trees is selected as a classifier among the other tested classification algorithms. Data set is used to train the classifier with 5-fold cross-validation. Results: As a result, accuracy, sensitivity, and specificity of 96.5%, 96.21%, 97.96% are achieved respectively. Conclusion: In this study, we have investigated whether EEG can provide efficient clues about the neuropathology of Alzheimer's Disease and mild cognitive impairment for early and accurate diagnosis. Accordingly, a decision support system that produces reproducible and objective results with high accuracy is developed.Item Automated Tuberculosis Detection Using Pre-Trained CNN and SVM(2021) Oltu, Burcu; Guney, Selda; Dengiz, Berna; Agildere, MuhtesemTuberculosis (TB) is a dreadfully contagious and life-threatening disease if left untreated. Therefore, early and accurate diagnosis is critical for treatment. Today, invasive, expensive, or time-consuming tests are performed for diagnosis. Unfortunately, accurate TB diagnosis is still a major challenge. In the proposed study, a decision support system that can automatically separate normal and TB chest X-ray (CXR) images is presented for objective and accurate diagnosis. In the presented methodology, first various data augmentation methods were applied to the data set, then pre-trained networks (VGG16, MobileNet), were employed as feature extractors from augmented CXR's. Afterward, the extracted features for all images were fed into a support vector machine classifier. In training process, 5-fold cross-validation was applied. As a result of this classification, it was concluded that TB can be diagnosed with an accuracy of 96,6% and an area under the ROC curve (AUC) of 0,99.