Mühendislik Fakültesi / Faculty of Engineering

Permanent URI for this collectionhttps://hdl.handle.net/11727/1401

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Author: search.filters.author.Ficici, Cansel

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    Structural EEG Signal Analysis For Sleep Apnea Classification
    (Başkent Üniversitesi Mühendislik Fakültesi, 2024-03-27) Kocak, Onur; Ficici, Cansel; Firat, Hikmet; Telatar, Ziya
    Objectives: Diagnosing the sleep apnea can be critical in preventing the person having sleep disorder from unhealthy results. The aim of this study is to obtain a sleep apnea scoring approach by comparing parametric and non-parametric power spectral density (PSD) estimation methods from EEG signals recorded from different brain regions (C4-M1 and O2-M1) for transient signal analysis of sleep apnea patients. Methods: Power Spectral Density (PSD) methods (Burg, Yule-Walker, periodogram, Welch and multi-taper) are examined for the detection of apnea transition states including pre-apnea, intra-apnea and post-apnea together with statistical methods. Results: In the experimental studies, EEG recordings available in the database were analyzed with PSD methods. Results showed that there are statistically significant differences between parametric and non-parametric methods applied for PSD analysis of apnea transition states in delta, theta, alpha and beta bands. Moreover, it was also revealed that PSD of EEG signals obtained from C4-M1 and O2-M1 channels were also found statistically different as proved by classification using the K-nearest neighbour (KNN) method. Conclusions: It was concluded that not only applying different PSD methods, but also EEG signals from different brain regions provided different statistical results in terms of apnea transition states as obtained from KNN classification.
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    Automatic Brain Tumor Detection and Volume Estimation in Multimodal MRI Scans via a Symmetry Analysis
    (2023) Ficici, Cansel; Erogul, Osman; Telatar, Ziya; Kocak, Onur; 0000-0002-8240-4046
    In this study, an automated medical decision support system is presented to assist physicians with accurate and immediate brain tumor detection, segmentation, and volume estimation from MRI which is very important in the success of surgical operations and treatment of brain tumor patients. In the proposed approach, first, tumor regions on MR images are labeled by an expert radiologist. Then, an automated medical decision support system is developed to extract brain tumor boundaries and to calculate their volumes by using multimodal MR images. One advantage of this study is that it provides an automated brain tumor detection and volume estimation algorithm that does not require user interactions by determining threshold values adaptively. Another advantage is that, because of the unsupervised approach, the proposed study realized tumor detection, segmentation, and volume estimation without using very large labeled training data. A brain tumor detection and segmentation algorithm is introduced that is based on the fact that the brain consists of two symmetrical hemispheres. Two main analyses, i.e., histogram and symmetry, were performed to automatically estimate tumor volume. The threshold values used for skull stripping were computed adaptively by examining the histogram distances between T1- and T1C-weighted brain MR images. Then, a symmetry analysis between the left and right brain lobes on FLAIR images was performed for whole tumor detection. The experiments were conducted on two brain MRI datasets, i.e., TCIA and BRATS. The experimental results were compared with the labeled expert results, which is known as the gold standard, to demonstrate the efficacy of the presented method. The performance evaluation results achieved accuracy values of 89.7% and 99.0%, and a Dice similarity coefficient value of 93.0% for whole tumor detection, active core detection, and volume estimation, respectively.
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    Automated Temporal Lobe Epilepsy And Psychogenic Nonepileptic Seizure Patient Discrimination From Multichannel EEG Recordings Using DWT Based Analysis
    (2022) Ficici, Cansel; Telatar, Ziya; Erogul, Osman
    Psychogenic nonepileptic seizure (PNES) and epileptic seizure resemble each other, behaviorally. This similarity causes misdiagnosis of PNES and epilepsy patients, thus patients suffering from PNES may be treated with antiepileptic drugs which can have various side effects. Furthermore, seizure is diagnosed after time consuming examination of electroencephalography (EEG) recordings realized by the expert. In this study, automated temporal lobe epilepsy (TLE) patient, PNES patient and healthy subject discrimination method from EEG signals is proposed in order to eliminate the misdiagnosis and long inspection time of EEG recordings. Also, this study provides automated approach for TLE interictal and ictal epoch classification, and TLE, PNES and healthy epoch classification. For this purpose, subbands of EEG signals are determined from discrete wavelet transform (DWT), then classification is performed using ensemble classifiers fed with energy feature extracted from the subbands. Experiments are conducted by trying two approaches for TLE, PNES and healthy epoch classification and patient discrimination. Results show that in the TLE, PNES and healthy epoch classification the highest accuracy of 97.2%, sensitivity of 97.9% and specificity of 98.1% were achieved by applying adaptive boosting method, and the highest accuracy of 87.1%, sensitivity of 86.0% and specificity of 93.6% were attained using random under sampling (RUS) boosting method in the TLE patient, PNES patients and the healthy subject discrimination.