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Comparison of Similarity Metrics in Microarray Experiment Retrieval
(2015)
Content-based retrieval of biological experiments is a recent challenge in bioinformatics. The task is to search in a database using a query-by-example without any meta-data annotation. In this study, for retrieving relevant ...
Author Recognition from Lyrics
(2015)
Music information retrieval has been an important task due to the wide use of internet and related technologies for entertainment. In previous studies, the problem has been considered using the meta-data or melodic content. ...
Inferring Similarity between Time-Series Microarrays: A Content-based Approach
(2015)
Public repositories for gene expression studies have been growing rapidly in the last decade. Retrieval of gene expression experiments based on textual descriptions does not provide sufficient data for biologists and ...
Inferring Microarray Relevance By Enrichment Of Chemotherapy Resistance-Based MicroRNA Sets
(2015)
Inferring relevance between microarray experiments stored in a gene expression repository is a helpful practice for biological data mining and information retrieval studies. In this study, we propose a knowledge-based ...
Evaluating Text Features for Lyrics-Based Songwriter Prediction
(2015)
We offer an automated way of estimating the author of a song using only its lyrics content. To this end, we introduce a complete text classification framework which takes raw lyrics data as input and report estimated ...
miSEA: MicroRNA Set Enrichment Analysis
(2015)
We introduce a novel web-based tool, miSEA, for evaluating the enrichment of relevant microRNA sets from microarray and miRNA-Seq experiments on paired samples, e.g. control vs. treatment. In addition to a group of previously ...
Retrieving Relevant Experiments: The Case of MicroRNA Microarrays
(2015)
Content-based retrieval of biological experiments in large public repositories is a recent challenge in computational biology and bioinformatics. The task is, in general, to search in a database using a query-by-example ...
Predicting microRNA Expression from Sequence
(2015)
Given the promoter sequence of a microRNA, we attempt to predict its expression using a regression model learnt from the expression levels of other microRNAs obtained through a microarray experiment. To our knowledge, this ...